SPARTA (23 Dec 2017) KOKKOS mode is enabled (../kokkos.cpp:39) using 0 GPU(s) per MPI task using 1 thread(s) per MPI task package kokkos package kokkos reduction parallel/reduce comm classic # advect particles via VSS collisional flow on a uniform grid # particles reflect off global box boundaries variable x index 10 variable y index 10 variable z index 10 variable lx equal $x*1.0e-5 variable lx equal 32*1.0e-5 variable ly equal $y*1.0e-5 variable ly equal 20*1.0e-5 variable lz equal $z*1.0e-5 variable lz equal 20*1.0e-5 variable n equal 10*$x*$y*$z variable n equal 10*32*$y*$z variable n equal 10*32*20*$z variable n equal 10*32*20*20 seed 12345 dimension 3 global gridcut 1.0e-5 boundary rr rr rr create_box 0 ${lx} 0 ${ly} 0 ${lz} create_box 0 0.00032 0 ${ly} 0 ${lz} create_box 0 0.00032 0 0.0002 0 ${lz} create_box 0 0.00032 0 0.0002 0 0.0002 Created orthogonal box = (0 0 0) to (0.00032 0.0002 0.0002) create_grid $x $y $z create_grid 32 $y $z create_grid 32 20 $z create_grid 32 20 20 WARNING: Could not acquire nearby ghost cells b/c grid partition is not clumped (../grid.cpp:381) Created 12800 child grid cells parent cells = 1 CPU time = 0.00607705 secs create/ghost percent = 67.4173 32.5827 balance_grid rcb part Balance grid migrated 12600 cells CPU time = 0.0209951 secs reassign/sort/migrate/ghost percent = 56.6046 0.0658642 27.6732 15.6564 species ar.species Ar mixture air Ar vstream 0.0 0.0 0.0 temp 273.15 global nrho 7.07043E22 global fnum 7.07043E6 collide vss air ar.vss create_particles air n $n create_particles air n 128000 Created 128000 particles CPU time = 0.010638 secs stats 100 compute temp temp stats_style step cpu np nattempt ncoll c_temp # first equilibrate with large timestep to unsort particles # then benchmark with normal timestep timestep 7.00E-8 run 30 Memory usage per proc in Mbytes: particles (ave,min,max) = 1.6875 1.6875 1.6875 grid (ave,min,max) = 1.51388 1.51388 1.51388 surf (ave,min,max) = 0 0 0 total (ave,min,max) = 3.20138 3.20138 3.20138 Step CPU Np Natt Ncoll c_temp 0 0 128000 0 0 272.52444 30 0.047180891 128000 128387 90334 272.52444 Loop time of 0.0472021 on 64 procs for 30 steps with 128000 particles Particle moves = 3840000 (3.84M) Cells touched = 18741137 (18.7M) Particle comms = 1763814 (1.76M) Boundary collides = 671112 (0.671M) Boundary exits = 0 (0K) SurfColl checks = 0 (0K) SurfColl occurs = 0 (0K) Surf reactions = 0 (0K) Collide attempts = 3716269 (3.72M) Collide occurs = 2697517 (2.7M) Reactions = 0 (0K) Particles stuck = 0 Particle-moves/CPUsec/proc: 1.27113e+06 Particle-moves/step: 128000 Cell-touches/particle/step: 4.8805 Particle comm iterations/step: 3.1 Particle fraction communicated: 0.459327 Particle fraction colliding with boundary: 0.174769 Particle fraction exiting boundary: 0 Surface-checks/particle/step: 0 Surface-collisions/particle/step: 0 Surf-reactions/particle/step: 0 Collision-attempts/particle/step: 0.967778 Collisions/particle/step: 0.702478 Reactions/particle/step: 0 Move time (%) = 0.0230207 (48.7704) Coll time (%) = 0.0123716 (26.2099) Sort time (%) = 0.000961207 (2.03636) Comm time (%) = 0.0107449 (22.7636) Modfy time (%) = 0 (0) Outpt time (%) = 8.01273e-05 (0.169754) Other time (%) = 2.35885e-05 (0.0499735) Particles: 2000 ave 2071 max 1888 min Histogram: 1 1 6 4 9 8 13 7 4 11 Cells: 200 ave 200 max 200 min Histogram: 64 0 0 0 0 0 0 0 0 0 GhostCell: 404.688 ave 772 max 124 min Histogram: 8 8 8 8 0 16 4 4 0 8 EmptyCell: 192.75 ave 482 max 0 min Histogram: 12 4 8 16 8 4 0 4 4 4 timestep 7.00E-9 run $t run 100 Memory usage per proc in Mbytes: particles (ave,min,max) = 1.6875 1.6875 1.6875 grid (ave,min,max) = 1.51388 1.51388 1.51388 surf (ave,min,max) = 0 0 0 total (ave,min,max) = 3.20138 3.20138 3.20138 Step CPU Np Natt Ncoll c_temp 30 0 128000 128387 90334 272.52444 100 0.017306089 128000 12225 8986 272.52444 130 0.02445507 128000 12447 9040 272.52444 Loop time of 0.0244717 on 64 procs for 100 steps with 128000 particles Particle moves = 12800000 (12.8M) Cells touched = 17686187 (17.7M) Particle comms = 658841 (0.659M) Boundary collides = 223877 (0.224M) Boundary exits = 0 (0K) SurfColl checks = 0 (0K) SurfColl occurs = 0 (0K) Surf reactions = 0 (0K) Collide attempts = 1199094 (1.2M) Collide occurs = 898649 (0.899M) Reactions = 0 (0K) Particles stuck = 0 Particle-moves/CPUsec/proc: 8.17271e+06 Particle-moves/step: 128000 Cell-touches/particle/step: 1.38173 Particle comm iterations/step: 1 Particle fraction communicated: 0.051472 Particle fraction colliding with boundary: 0.0174904 Particle fraction exiting boundary: 0 Surface-checks/particle/step: 0 Surface-collisions/particle/step: 0 Surf-reactions/particle/step: 0 Collision-attempts/particle/step: 0.0936792 Collisions/particle/step: 0.070207 Reactions/particle/step: 0 Move time (%) = 0.0116418 (47.5723) Coll time (%) = 0.00537232 (21.9532) Sort time (%) = 0.00195684 (7.99632) Comm time (%) = 0.00533772 (21.8118) Modfy time (%) = 0 (0) Outpt time (%) = 9.71481e-05 (0.396981) Other time (%) = 6.59153e-05 (0.269353) Particles: 2000 ave 2081 max 1898 min Histogram: 1 2 5 9 9 11 10 6 7 4 Cells: 200 ave 200 max 200 min Histogram: 64 0 0 0 0 0 0 0 0 0 GhostCell: 404.688 ave 772 max 124 min Histogram: 8 8 8 8 0 16 4 4 0 8 EmptyCell: 192.75 ave 482 max 0 min Histogram: 12 4 8 16 8 4 0 4 4 4