SPARTA (23 Dec 2017) KOKKOS mode is enabled (../kokkos.cpp:39) using 0 GPU(s) per MPI task using 2 thread(s) per MPI task package kokkos package kokkos reduction parallel/reduce comm classic # advect particles via VSS collisional flow on a uniform grid # particles reflect off global box boundaries variable x index 10 variable y index 10 variable z index 10 variable lx equal $x*1.0e-5 variable lx equal 64*1.0e-5 variable ly equal $y*1.0e-5 variable ly equal 80*1.0e-5 variable lz equal $z*1.0e-5 variable lz equal 80*1.0e-5 variable n equal 10*$x*$y*$z variable n equal 10*64*$y*$z variable n equal 10*64*80*$z variable n equal 10*64*80*80 seed 12345 dimension 3 global gridcut 1.0e-5 boundary rr rr rr create_box 0 ${lx} 0 ${ly} 0 ${lz} create_box 0 0.00064 0 ${ly} 0 ${lz} create_box 0 0.00064 0 0.0008 0 ${lz} create_box 0 0.00064 0 0.0008 0 0.0008 Created orthogonal box = (0 0 0) to (0.00064 0.0008 0.0008) create_grid $x $y $z create_grid 64 $y $z create_grid 64 80 $z create_grid 64 80 80 WARNING: Could not acquire nearby ghost cells b/c grid partition is not clumped (../grid.cpp:381) Created 409600 child grid cells parent cells = 1 CPU time = 0.00769413 secs create/ghost percent = 65.2715 34.7285 balance_grid rcb part Balance grid migrated 396800 cells CPU time = 0.0616679 secs reassign/sort/migrate/ghost percent = 32.3633 0.203273 39.0914 28.3421 species ar.species Ar mixture air Ar vstream 0.0 0.0 0.0 temp 273.15 global nrho 7.07043E22 global fnum 7.07043E6 collide vss air ar.vss create_particles air n $n create_particles air n 4096000 Created 4096000 particles CPU time = 0.0423548 secs stats 100 compute temp temp stats_style step cpu np nattempt ncoll c_temp # first equilibrate with large timestep to unsort particles # then benchmark with normal timestep timestep 7.00E-8 run 30 Memory usage per proc in Mbytes: particles (ave,min,max) = 15.6276 15.6276 15.6276 grid (ave,min,max) = 3.7131 2.95138 3.88888 surf (ave,min,max) = 0 0 0 total (ave,min,max) = 19.3407 18.579 19.5165 Step CPU Np Natt Ncoll c_temp 0 0 4096000 0 0 273.01785 30 1.0230505 4096000 4107816 2891250 273.01785 Loop time of 1.08329 on 32 procs for 30 steps with 4096000 particles Particle moves = 122880000 (123M) Cells touched = 608273907 (608M) Particle comms = 14392669 (14.4M) Boundary collides = 6646665 (6.65M) Boundary exits = 0 (0K) SurfColl checks = 0 (0K) SurfColl occurs = 0 (0K) Surf reactions = 0 (0K) Collide attempts = 118963098 (119M) Collide occurs = 86377521 (86.4M) Reactions = 0 (0K) Particles stuck = 0 Particle-moves/CPUsec/proc: 3.54475e+06 Particle-moves/step: 4.096e+06 Cell-touches/particle/step: 4.95015 Particle comm iterations/step: 3 Particle fraction communicated: 0.117128 Particle fraction colliding with boundary: 0.0540907 Particle fraction exiting boundary: 0 Surface-checks/particle/step: 0 Surface-collisions/particle/step: 0 Surf-reactions/particle/step: 0 Collision-attempts/particle/step: 0.968124 Collisions/particle/step: 0.702942 Reactions/particle/step: 0 Move time (%) = 0.459668 (42.4326) Coll time (%) = 0.367289 (33.9049) Sort time (%) = 0.108003 (9.96989) Comm time (%) = 0.146245 (13.5001) Modfy time (%) = 0 (0) Outpt time (%) = 0.00190427 (0.175786) Other time (%) = 0.000181066 (0.0167145) Particles: 128000 ave 128847 max 127285 min Histogram: 3 1 4 7 3 4 5 2 1 2 Cells: 12800 ave 12800 max 12800 min Histogram: 32 0 0 0 0 0 0 0 0 0 GhostCell: 4797.12 ave 6784 max 2194 min Histogram: 2 4 0 2 8 0 8 0 0 8 EmptyCell: 1986.06 ave 3612 max 441 min Histogram: 2 0 8 0 10 2 0 8 0 2 timestep 7.00E-9 run $t run 100 Memory usage per proc in Mbytes: particles (ave,min,max) = 15.6276 15.6276 15.6276 grid (ave,min,max) = 3.7131 2.95138 3.88888 surf (ave,min,max) = 0 0 0 total (ave,min,max) = 19.3407 18.579 19.5165 Step CPU Np Natt Ncoll c_temp 30 0 4096000 4107816 2891250 273.01785 100 0.66597749 4096000 393018 289324 273.01785 130 0.95882675 4096000 398533 289672 273.01785 Loop time of 1.01524 on 32 procs for 100 steps with 4096000 particles Particle moves = 409600000 (410M) Cells touched = 571030963 (571M) Particle comms = 4925910 (4.93M) Boundary collides = 2215751 (2.22M) Boundary exits = 0 (0K) SurfColl checks = 0 (0K) SurfColl occurs = 0 (0K) Surf reactions = 0 (0K) Collide attempts = 38375534 (38.4M) Collide occurs = 28742106 (28.7M) Reactions = 0 (0K) Particles stuck = 0 Particle-moves/CPUsec/proc: 1.26079e+07 Particle-moves/step: 4.096e+06 Cell-touches/particle/step: 1.39412 Particle comm iterations/step: 1 Particle fraction communicated: 0.0120261 Particle fraction colliding with boundary: 0.00540955 Particle fraction exiting boundary: 0 Surface-checks/particle/step: 0 Surface-collisions/particle/step: 0 Surf-reactions/particle/step: 0 Collision-attempts/particle/step: 0.0936903 Collisions/particle/step: 0.0701712 Reactions/particle/step: 0 Move time (%) = 0.419492 (41.3195) Coll time (%) = 0.183176 (18.0426) Sort time (%) = 0.353449 (34.8143) Comm time (%) = 0.0558231 (5.49851) Modfy time (%) = 0 (0) Outpt time (%) = 0.00294469 (0.290048) Other time (%) = 0.000355978 (0.0350635) Particles: 128000 ave 128617 max 127405 min Histogram: 2 1 2 7 5 5 5 2 2 1 Cells: 12800 ave 12800 max 12800 min Histogram: 32 0 0 0 0 0 0 0 0 0 GhostCell: 4797.12 ave 6784 max 2194 min Histogram: 2 4 0 2 8 0 8 0 0 8 EmptyCell: 1986.06 ave 3612 max 441 min Histogram: 2 0 8 0 10 2 0 8 0 2